Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACATCTCGCAGCCAAGAACAGCCACCATGAATGCAT
.(((((((((((.((((((((&)))))))).).))))))...................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015577
GeneSymbolRAI14
Binding site460,501
Score0.923
Seed1
Au0.5
Energy-23.7
Binding len41
Me-5.082
Phylopstem3.0053747741935477
Phylopflank2.9071432587499997
Longest consecutive pairings8
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure