Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGAGGCGCTGCAGCAGCAAG
((((.(((((((.(((..(((&)))....)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015577
GeneSymbolRAI14
Binding site2946,2969
Score0.872
Seed0
Au0.412
Energy-20.1
Binding len23
Me-9.346
Phylopstem3.0768115714285718
Phylopflank4.3270540785
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure