Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCGGCAGCGCGTGGAGTGCGGCGTCCTGGAGCTGCGGA
((((((((((((((((((((.&)))))))))..)))...................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015585
GeneSymbolCFAP61
Binding site14,56
Score0.846
Seed1
Au0.397
Energy-22.9
Binding len42
Me-3.938
Phylopstem-0.8554636536585367
Phylopflank0.49941333200000027
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end7
Position5UTR
2D Structure