Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTGGCGCAGCTGCAGCTGG
...(((((((((((((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015597
GeneSymbolGPSM1
Binding site1277,1298
Score0.846
Seed0
Au0.265
Energy-24.0
Binding len15
Me-6.515
Phylopstem2.2277394307692306
Phylopflank2.0708687225
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure