Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATTGTGATGTGTGCCAAAAGGTG
((((((((((((..........&.)))))))))...))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015599
GeneSymbolPGM3
Binding site4870,4895
Score0.846
Seed1
Au0.574
Energy-15.8
Binding len17
Me-7.052
Phylopstem5.3849029999999996
Phylopflank3.8212976837499997
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end0
Position3UTR
2D Structure