Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACCCCAGCTGCAC
.((((((((.((.(((.....&))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015599
GeneSymbolPGM3
Binding site563,578
Score0.923
Seed1
Au0.529
Energy-19.5
Binding len15
Me-6.325
Phylopstem-0.44948099999999996
Phylopflank-0.06476646375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure