Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTGGGCCGCACGTTGCAC
.(((((((((((((.......&.))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015599
GeneSymbolPGM3
Binding site5162,5183
Score0.923
Seed1
Au0.544
Energy-19.6
Binding len16
Me-4.762
Phylopstem6.020015642857142
Phylopflank3.416639258749999
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end1
Position3UTR
2D Structure