Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATGTTGTGCTGGGG
.(((((((((..((((......&))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015601
GeneSymbolHERC4
Binding site246,262
Score1.0
Seed1
Au0.544
Energy-16.4
Binding len16
Me-9.965
Phylopstem0.4412894333333333
Phylopflank0.3839949212499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure