Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGATTGATGCTGGA
..(((((((.((((.(((((((&)))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015607
GeneSymbolCHTOP
Binding site1118,1137
Score0.846
Seed1
Au0.603
Energy-16.0
Binding len19
Me-6.935
Phylopstem1.2852744285714286
Phylopflank1.3441283487499998
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure