Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGGAGGGGGGGTTTC
(((((((....(((((((.((&)).)))))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_015607
GeneSymbolCHTOP
Binding site1270,1288
Score0.846
Seed1
Au0.544
Energy-22.0
Binding len18
Me-11.375
Phylopstem-1.520252142857143
Phylopflank0.6923267218749999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure