Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGGCCCCTGGGCCGCCTGGAGCAGCTGTGGCTGCC
..((((((((((((((.((((&.))))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015613
GeneSymbolLRIT1
Binding site338,379
Score0.923
Seed1
Au0.309
Energy-27.2
Binding len23
Me-4.957
Phylopstem-0.04103826428571427
Phylopflank-0.18373672499999993
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure