Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAGAAGGAGGTGCAGCTGCGGCGACAGC
(((..((((((((((((....&.))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015621
GeneSymbolCCDC69
Binding site871,903
Score0.846
Seed0
Au0.368
Energy-21.8
Binding len19
Me-11.089
Phylopstem0.4470866833333333
Phylopflank-0.05067547999999998
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure