Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAACCAGGTGGTCCTGTCAAGGCAGCTGTCAGA
((((((((((((((((..(((&)))))))))................))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015621
GeneSymbolCCDC69
Binding site810,847
Score0.974
Seed1
Au0.382
Energy-21.3
Binding len37
Me-3.938
Phylopstem-0.19456646363636368
Phylopflank-0.0026625012500000045
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end6
PositionCDS
2D Structure