Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCTATAGCCAGTGTGCTGCTGCAT
.((((((.(((((((((((((&))))....))))))).....)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015642
GeneSymbolZBTB20
Binding site7525,7555
Score0.846
Seed1
Au0.515
Energy-21.2
Binding len30
Me-6.107
Phylopstem0.25395774090909096
Phylopflank0.2747182175
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure