Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCTGCAGCTGTAGA
((((((((((((..((.....&))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015646
GeneSymbolRAP1B
Binding site1548,1565
Score0.923
Seed1
Au0.618
Energy-22.3
Binding len17
Me-6.084
Phylopstem4.9283175
Phylopflank4.3056293875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure