Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGAGGCCGAGGTTGCAGT
((((((((.(((((...((((&))))....))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015646
GeneSymbolRAP1B
Binding site6115,6138
Score1.0
Seed1
Au0.441
Energy-22.1
Binding len23
Me-5.962
Phylopstem-0.026499750000000002
Phylopflank-0.27208646994999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure