Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCCGAGCAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015646
GeneSymbolRAP1B
Binding site7450,7476
Score0.923
Seed0
Au0.412
Energy-22.1
Binding len26
Me-5.728
Phylopstem0.034233444444444455
Phylopflank-0.05719851
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure