Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCACCCGGCCAGGTT
(((((((......(((((....&)))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015650
GeneSymbolTRAF3IP1
Binding site3683,3700
Score0.923
Seed1
Au0.5
Energy-17.1
Binding len17
Me-16.011
Phylopstem-0.4005805714285714
Phylopflank0.023829160000000002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure