Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCCTAGCTGACTCTTTCATTTATTTCCTTATTGCTTGGTATGTCAGGA
.((((((((((...((((....&.))))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015657
GeneSymbolABCA12
Binding site2972,3022
Score0.923
Seed1
Au0.588
Energy-18.5
Binding len19
Me-9.286
Phylopstem2.09598706
Phylopflank3.2553003612499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure