Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAAGCAGGA
....(((((((((((((((((&)))))))..........................)))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_015659
GeneSymbolRSL1D1
Binding site3953,4000
Score0.846
Seed0
Au0.456
Energy-25.2
Binding len47
Me-9.547
Phylopstem0.680372342826087
Phylopflank0.577918619625
Longest consecutive pairings7
Position of longest consecutive pairings40
Pairings in 3prime end8
Position3UTR
2D Structure