Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGGGTGGCCAGA
..(((((.(((..(((((....&)))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015662
GeneSymbolIFT172
Binding site3311,3327
Score0.846
Seed0
Au0.412
Energy-18.8
Binding len16
Me-11.907
Phylopstem1.52085984
Phylopflank3.90622658125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure