Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATCGAAGCCAGGTG
(((((((.....((((((....&))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015662
GeneSymbolIFT172
Binding site2717,2735
Score0.923
Seed1
Au0.471
Energy-18.7
Binding len18
Me-14.722
Phylopstem4.300776
Phylopflank4.92452492
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure