Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGCAAAGAGCCTGGGAGGAGAGGCTGCAGT
.....(((((((((((((((.&))))).................)))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_015662
GeneSymbolIFT172
Binding site3368,3401
Score0.846
Seed0
Au0.456
Energy-24.5
Binding len33
Me-13.666
Phylopstem4.377678081250001
Phylopflank4.6333669725
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure