Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCGCTGCGGCTGCGT
.(((((((((((.((..((((&))))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015662
GeneSymbolIFT172
Binding site3,23
Score1.0
Seed1
Au0.346
Energy-26.2
Binding len20
Me-5.316
Phylopstem2.0967233000000003
Phylopflank0.027556066250000177
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure