Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGAAACCGTGGCTGCC
..((((((((((((....(((&)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015662
GeneSymbolIFT172
Binding site4745,4764
Score1.0
Seed1
Au0.441
Energy-22.8
Binding len19
Me-5.925
Phylopstem4.30761775
Phylopflank4.718561364999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure