Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATATGGCCGACAGCCAACCTGGTGCT
..(((((((((((((((.(((&))).)))))))).))))........))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015668
GeneSymbolRGS22
Binding site3727,3756
Score0.846
Seed1
Au0.515
Energy-19.5
Binding len29
Me-4.957
Phylopstem2.9590134166666666
Phylopflank2.6836576159999996
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure