Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGCAGCGGCAGCTGCAGC
((((((((((.(((((..(((&)))..))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015672
GeneSymbolRIMBP3
Binding site818,840
Score0.846
Seed1
Au0.279
Energy-30.9
Binding len22
Me-6.762
Phylopstem1.2377949000000004
Phylopflank0.5366389567500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure