Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTATGACATTTTATTTGGAGATACACCGCGGCCTGCT
..((((((((((.((((....&.))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015677
GeneSymbolSH3YL1
Binding site603,642
Score1.0
Seed1
Au0.588
Energy-21.2
Binding len17
Me-6.246
Phylopstem0.08782696363636365
Phylopflank0.32041325750000005
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure