Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGAGCCCGGTGCT
..(((.(((.((((.((((((&)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015680
GeneSymbolCNPPD1
Binding site1227,1245
Score0.846
Seed0
Au0.382
Energy-20.4
Binding len18
Me-8.836
Phylopstem4.418647
Phylopflank2.6188188525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure