Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAATGCAGCCTACCAGGCTGGTCCTCTGGGACCTGCCCTGGCAGCTGCAGT
((((((((((((((.(((((.&.))).)).)))).......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015690
GeneSymbolSTK36
Binding site3748,3800
Score0.846
Seed1
Au0.353
Energy-24.4
Binding len30
Me-4.673
Phylopstem1.852406857142857
Phylopflank1.95075775125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure