Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAACAACCTCCTGCGGCTGCC
..((((((((((((((.((((&))))..))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015692
GeneSymbolCPAMD8
Binding site3565,3590
Score1.0
Seed1
Au0.412
Energy-25.1
Binding len25
Me-4.957
Phylopstem2.9828274444444443
Phylopflank2.0556359950000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure