Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGCTGCAGCCACCCTCCCACCCACTGCAGG
((((((((((((((((.((((&)))))))))))))))...............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015692
GeneSymbolCPAMD8
Binding site1528,1564
Score0.846
Seed1
Au0.426
Energy-25.0
Binding len36
Me-3.938
Phylopstem4.180622283870968
Phylopflank3.8615196312499993
Longest consecutive pairings15
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure