Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGACGCTTTCTGCTGTGTGTGCCTGGA
.((.((((((((..(((((...&.)))))..)))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015695
GeneSymbolBRPF3
Binding site885,912
Score0.923
Seed0
Au0.574
Energy-23.1
Binding len20
Me-8.971
Phylopstem5.94495375
Phylopflank4.5182717425
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure