Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTATGCCAGGTG
((((((((((....((((....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015695
GeneSymbolBRPF3
Binding site4499,4514
Score1.0
Seed1
Au0.397
Energy-19.6
Binding len15
Me-12.255
Phylopstem0.6834417899999999
Phylopflank0.597330975
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure