Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCAGCATCGAGAGAGCAAGATGGAGCATCTAGCGCAGCTGCGC
.(((((((((((((((.((((&)))).)))))...........................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015703
GeneSymbolRRP7A
Binding site736,784
Score0.846
Seed1
Au0.456
Energy-25.7
Binding len48
Me-3.793
Phylopstem0.690579819047619
Phylopflank-0.355531585
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure