Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGTGCAGCTAGGGCTGCAGA
((((((((..((((((((((.&))).)))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015705
GeneSymbolSGSM3
Binding site2819,2841
Score0.846
Seed1
Au0.471
Energy-22.1
Binding len22
Me-6.236
Phylopstem0.02302509999999998
Phylopflank-0.2196850825000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure