Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCCCCTCTGTCCGGGGGACACGCGCATGTGTTTGCCAGGG
.(((((((.(((((((......&.)))).))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015711
GeneSymbolBICRA
Binding site5160,5203
Score0.846
Seed1
Au0.324
Energy-19.7
Binding len18
Me-4.85
Phylopstem-0.15798575000000004
Phylopflank-0.00330041749999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure