Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGACGGGCGCTGGAGGGGCAGCGGCCGTGGCTGCGGG
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015711
GeneSymbolBICRA
Binding site618,658
Score0.923
Seed1
Au0.206
Energy-26.5
Binding len18
Me-3.938
Phylopstem0.68069725
Phylopflank1.6795311900000003
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure