Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGGCTCCTTCATCCACACCCCCGGACCCGAGCTGCAGA
((((((((..((((....(((&.)))....))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015715
GeneSymbolPLA2G3
Binding site427,470
Score0.846
Seed1
Au0.353
Energy-21.4
Binding len23
Me-7.205
Phylopstem0.10723197500000002
Phylopflank-0.035194584999999945
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure