Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGCTTCTGCCGGGG
.(((((((.....(((((....&))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015719
GeneSymbolCOL5A3
Binding site179,197
Score0.846
Seed1
Au0.324
Energy-19.0
Binding len18
Me-13.553
Phylopstem1.4790407142857143
Phylopflank0.4955400337500001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure