Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGGAGATTGGCATCCAGAACTATTCCACAACCAGCAGCTGCC
..((((((((((((((..((.&.)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015720
GeneSymbolPODXL2
Binding site1449,1497
Score0.827
Seed1
Au0.368
Energy-25.3
Binding len19
Me-4.957
Phylopstem4.5669468
Phylopflank3.3453123999999996
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure