Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTAGTGACTGCGGCCTGCAT
.(((((((((((((.((.(((&))).))..))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015723
GeneSymbolPNPLA8
Binding site80,103
Score1.0
Seed1
Au0.382
Energy-22.2
Binding len23
Me-4.529
Phylopstem-0.23523058571428573
Phylopflank0.0641978075
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure