Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGGAACCCAATCAGTTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGCAGCTGCC
..(((((((((((((((((((&))))..................)))))))......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015727
GeneSymbolTACR1
Binding site640,700
Score0.846
Seed1
Au0.441
Energy-22.1
Binding len60
Me-4.957
Phylopstem4.038555606779659
Phylopflank3.4715377762500004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure