Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGCAGCCTGCCTACGGCGGATGGACTGTGGCCGCTGCGAC
(((((((.(((((((((((((&)))).)))))))......................)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015847
GeneSymbolMBD1
Binding site1056,1101
Score0.846
Seed1
Au0.338
Energy-23.2
Binding len45
Me-6.251
Phylopstem2.049737944444444
Phylopflank1.8559032237499997
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure