Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGGCAGCTGTGAG
((((((((((((((((.....&))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015853
GeneSymbolUBXN1
Binding site851,869
Score0.904
Seed1
Au0.324
Energy-22.2
Binding len18
Me-3.938
Phylopstem3.173492294117647
Phylopflank1.9502814925000003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure