Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATGTTGTTGTATGCCAA
...(((((((((((........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015859
GeneSymbolGTF2A1
Binding site1436,1455
Score0.846
Seed0
Au0.676
Energy-16.6
Binding len13
Me-7.483
Phylopstem1.5681643636363634
Phylopflank1.0681588075
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure