Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACAGCTGTTTGCCAAGCTGCT
..((((((((((((((.(((.&))).))))))))......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015869
GeneSymbolPPARG
Binding site1542,1567
Score0.808
Seed1
Au0.485
Energy-22.3
Binding len25
Me-4.957
Phylopstem4.3688757764999995
Phylopflank4.6951841632499995
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure