Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATCCTGGACCAGGGTGGCTTCAAGATCTATGTGTGGCAGGG
.((((.((((((...(((((((&.))))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015873
GeneSymbolVILL
Binding site977,1023
Score0.923
Seed0
Au0.426
Energy-20.5
Binding len20
Me-8.576
Phylopstem3.5567975714285716
Phylopflank2.7100652374999994
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure