Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGTGCCGCCACGCCCAGCAAGGATATCAACCAGCTGCAGA
(((((((((((((....((((&))))....))))).......................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015873
GeneSymbolVILL
Binding site827,872
Score0.846
Seed1
Au0.441
Energy-22.6
Binding len45
Me-5.763
Phylopstem0.6354443055555554
Phylopflank2.5302988049999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure