Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGTTTTATTATCTTTACTTTTTTGGGGGGTTGGAGGGG
...((((.(((((.(((((..&.)))))))))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_015874
GeneSymbolRBPJ
Binding site2687,2725
Score0.923
Seed0
Au0.603
Energy-24.8
Binding len17
Me-9.685
Phylopstem1.2298426
Phylopflank1.4417767837499995
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure